NUI Galway NBIPI cmi
Educational Material  
Microscopy Primer  
Global microscopy links Many links to microscopy related information here.
Confocal Microscopy  
NBIPI moodle site Free online modules in all aspects of biophotonics and imaging
Loci site good material on this page - optical sectioning
iBiology site free microscopy courseware - very good
Microscopy now update some good material here
Bitesizebio microscopy and imaging - for biologists
Image Aquisition and Processing  
Volocity 3d processing software , running our optigrid system
Image J Free image processing software - the research standard
Mac Biophotonics ImageJ Specification of the image J platform to bio imaging - lots of extra image processing modules
Voxx Free software for volume rendering in 3d microscopy
BioImageXD Free analysis and visualisation software for biomedical images
Filters and Fluorophores/Stains/Dyes  
Fluorophore chooser  
The stains file
Fluorophores.org database of fluorescent dyes and applications
Omega filters fluorophore chooser  
Spectral viewer Invitrogen's spectral viewer
Light Lab tablet based spectra viewer
Super Resolution Techniques  
Cell webinar Super resolution : light microscopy in the 21st century
Random but good  
The Cell picture show  
Microscopy Calculators  
Refractive index calculator GEsite - has smart phone apps for the same